STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOABP00000001554annotation not available (93 aa)    
Predicted Functional Partners:
ENSOABP00000020320
Zgc:153681.
   
 0.953
ENSOABP00000055021
SRSF protein kinase 1b.
    
 0.937
ENSOABP00000023701
SRSF protein kinase 1a.
    
 0.936
ENSOABP00000038580
annotation not available
  
 0.905
ENSOABP00000009342
Serine and arginine rich splicing factor 2a.
  
 0.900
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.895
ENSOABP00000000920
Aly/REF export factor.
  
 0.885
ENSOABP00000018297
annotation not available
  
 0.881
PABPN1L
PABPN1 like, cytoplasmic.
  
 0.879
ENSOABP00000050046
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
  
 0.874
Your Current Organism:
Oreochromis aureus
NCBI taxonomy Id: 47969
Other names: O. aureus, Oreochromis aurea, blue tilapia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.