STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOABP00000001596Tetratricopeptide repeat domain 5. (444 aa)    
Predicted Functional Partners:
ENSOABP00000055230
Guanine monophosphate synthase.
  
 0.963
ENSOABP00000058137
glutamyl-prolyl-tRNA synthetase 1.
  
 0.955
ENSOABP00000052701
Ribosomal protein L11.
  
 
 0.952
ENSOABP00000037650
Ribosomal protein L13a.
  
 
 0.945
ENSOABP00000007438
Ribosomal protein L23.
  
 
 0.939
ENSOABP00000001155
Ribosomal protein L9.
  
 
 0.937
ENSOABP00000034170
Ribosomal protein, large, P0.
   
 
 0.935
ENSOABP00000042694
Ribosomal protein L23a.
   
 
 0.935
ENSOABP00000017159
Ribosomal protein L8.
   
 
 0.930
ENSOABP00000050593
Ribosomal protein L4.
   
 
 0.925
Your Current Organism:
Oreochromis aureus
NCBI taxonomy Id: 47969
Other names: O. aureus, Oreochromis aurea, blue tilapia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.