STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOABP00000008564SPT4 homolog, DSIF elongation factor subunit. (117 aa)    
Predicted Functional Partners:
ENSOABP00000021371
SPT5 homolog, DSIF elongation factor subunit.
    
 0.999
ENSOABP00000048077
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.999
ENSOABP00000010069
Polymerase (RNA) II (DNA directed) polypeptide A.
    
 0.998
ENSOABP00000032772
Polymerase (RNA) II (DNA directed) polypeptide G-like.
   
 0.998
ENSOABP00000042639
Polymerase (RNA) II (DNA directed) polypeptide B.
    
 0.998
ENSOABP00000010103
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.997
ENSOABP00000013105
Polymerase (RNA) II (DNA directed) polypeptide D.
   
 0.996
ENSOABP00000031160
Polymerase (RNA) II (DNA directed) polypeptide J.
   
 0.995
ENSOABP00000038032
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.995
POLR2E
RNA polymerase II subunit E.
   
 0.995
Your Current Organism:
Oreochromis aureus
NCBI taxonomy Id: 47969
Other names: O. aureus, Oreochromis aurea, blue tilapia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.