STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOABP00000010012WD repeat domain 55. (421 aa)    
Predicted Functional Partners:
ENSOABP00000054103
WD repeat domain 12.
   
 
 0.933
ENSOABP00000047742
Nucleolar protein interacting with the FHA domain of MKI67.
   
   0.819
ENSOABP00000026555
WD repeat domain 18.
   
 
 0.781
ENSOABP00000022537
WD repeat domain 74.
   
    0.777
ENSOABP00000023192
annotation not available
   
    0.758
ENSOABP00000031880
Tetratricopeptide repeat domain 27.
   
    0.758
ENSOABP00000040297
tRNA methyltransferase 6.
   
    0.756
ENSOABP00000044339
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18.
   
  0.729
ENSOABP00000054287
Pescadillo.
   
   0.722
ENSOABP00000035552
annotation not available
 
      0.707
Your Current Organism:
Oreochromis aureus
NCBI taxonomy Id: 47969
Other names: O. aureus, Oreochromis aurea, blue tilapia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.