STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOABP00000016933NPL4 homolog, ubiquitin recognition factor. (624 aa)    
Predicted Functional Partners:
ENSOABP00000038979
UBX domain protein 7.
    
 0.999
ENSOABP00000041739
annotation not available
   
 0.999
ENSOABP00000000182
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.994
ENSOABP00000018821
Derlin 1.
    
 0.989
ENSOABP00000002839
FA complementation group L.
    
 0.987
ENSOABP00000012970
FA complementation group F.
    
 0.987
ENSOABP00000033593
annotation not available
    
 0.987
ENSOABP00000014870
FA complementation group B.
    
 0.986
ENSOABP00000042484
FA complementation group C.
    
 0.986
ENSOABP00000047733
FA complementation group G.
    
 0.986
Your Current Organism:
Oreochromis aureus
NCBI taxonomy Id: 47969
Other names: O. aureus, Oreochromis aurea, blue tilapia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.