STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (277 aa)    
Predicted Functional Partners:
ENSOABP00000004041
NPR2 like, GATOR1 complex subunit.
    
 
 0.693
ENSOABP00000019271
Regulatory associated protein of MTOR, complex 1.
    
 
 0.692
ENSOABP00000035891
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 
 0.692
ENSOABP00000008399
NPR3-like, GATOR1 complex subunit.
    
 
 0.679
ENSOABP00000005383
WD repeat domain 24.
    
 
 0.676
ENSOABP00000007546
Kaptin (actin binding protein).
    
   0.666
ENSOABP00000015283
SEH1-like (S. cerevisiae).
    
   0.666
ENSOABP00000041527
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
   0.666
ENSOABP00000050849
WD repeat domain 59.
    
   0.666
ENSOABP00000029751
Integrin alpha FG-GAP repeat containing 2.
    
   0.516
Your Current Organism:
Oreochromis aureus
NCBI taxonomy Id: 47969
Other names: O. aureus, Oreochromis aurea, blue tilapia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.