STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOABP00000052431Matrix metallopeptidase 21. (604 aa)    
Predicted Functional Partners:
ENSOABP00000020047
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
  0.840
ENSOABP00000010270
TIMP metallopeptidase inhibitor 2b.
    
 0.760
ENSOABP00000058418
TIMP metallopeptidase inhibitor 2a.
    
 0.760
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.752
ENSOABP00000011047
Zmp:0000000846.
    
  0.647
ENSOABP00000011329
annotation not available
    
  0.647
ENSOABP00000016972
Tenascin C.
    
  0.647
ENSOABP00000025247
annotation not available
    
  0.647
ENSOABP00000046504
Tenascin R (restrictin, janusin).
    
  0.647
ENSOABP00000047132
Tenascin N.
    
  0.647
Your Current Organism:
Oreochromis aureus
NCBI taxonomy Id: 47969
Other names: O. aureus, Oreochromis aurea, blue tilapia
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