STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSOABP00000053364Si:ch211-10e2.1. (246 aa)    
Predicted Functional Partners:
ENSOABP00000052119
SPO11 initiator of meiotic double stranded breaks.
   
 
 0.618
ENSOABP00000004574
Testis expressed 11.
    
 
 0.614
ENSOABP00000038032
SPT16 homolog, facilitates chromatin remodeling subunit.
      
 0.530
ENSOABP00000015233
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
   
 
 0.516
ENSOABP00000041739
annotation not available
      
 0.501
ENSOABP00000007779
mutS homolog 4.
   
 
 0.493
ENSOABP00000019231
annotation not available
    
 
 0.483
ENSOABP00000057779
REC114 meiotic recombination protein.
    
 
 0.483
ENSOABP00000022835
Activating signal cointegrator 1 complex subunit 3.
      
 0.472
ENSOABP00000000925
RecQ helicase-like 5.
    
 
 0.461
Your Current Organism:
Oreochromis aureus
NCBI taxonomy Id: 47969
Other names: O. aureus, Oreochromis aurea, blue tilapia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.