Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ksgA | plsC | CPX_001597 | CPX_001444 | Dimethyladenosine transferase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.806 |
ksgA | psd2 | CPX_001597 | CPX_001688 | Dimethyladenosine transferase. | Phosphatidylserine decarboxylase proenzyme 2; Belongs to the phosphatidylserine decarboxylase family. | 0.823 |
ksgA | pssA | CPX_001597 | CPX_001687 | Dimethyladenosine transferase. | Phosphatidylserine synthase. | 0.818 |
plsC | ksgA | CPX_001444 | CPX_001597 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Dimethyladenosine transferase. | 0.806 |
plsC | psd2 | CPX_001444 | CPX_001688 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Phosphatidylserine decarboxylase proenzyme 2; Belongs to the phosphatidylserine decarboxylase family. | 0.883 |
plsC | pssA | CPX_001444 | CPX_001687 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Phosphatidylserine synthase. | 0.883 |
psd2 | ksgA | CPX_001688 | CPX_001597 | Phosphatidylserine decarboxylase proenzyme 2; Belongs to the phosphatidylserine decarboxylase family. | Dimethyladenosine transferase. | 0.823 |
psd2 | plsC | CPX_001688 | CPX_001444 | Phosphatidylserine decarboxylase proenzyme 2; Belongs to the phosphatidylserine decarboxylase family. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.883 |
psd2 | pssA | CPX_001688 | CPX_001687 | Phosphatidylserine decarboxylase proenzyme 2; Belongs to the phosphatidylserine decarboxylase family. | Phosphatidylserine synthase. | 0.957 |
pssA | ksgA | CPX_001687 | CPX_001597 | Phosphatidylserine synthase. | Dimethyladenosine transferase. | 0.818 |
pssA | plsC | CPX_001687 | CPX_001444 | Phosphatidylserine synthase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.883 |
pssA | psd2 | CPX_001687 | CPX_001688 | Phosphatidylserine synthase. | Phosphatidylserine decarboxylase proenzyme 2; Belongs to the phosphatidylserine decarboxylase family. | 0.957 |