STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98377.1Hypothetical protein. (259 aa)    
Predicted Functional Partners:
AKJ07927.1
ABC transporter, ATP-binding protein.
  
     0.704
AKJ07926.1
Transport ATP-binding protein CydC.
  
    0.671
AKJ02936.1
Putative periplasmic protein.
 
     0.616
AKJ07307.1
Hypothetical protein.
  
 
   0.606
AKJ06403.1
Membrane protein.
  
     0.577
AKJ06461.1
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
  
     0.568
AKJ07562.1
Putative poly(beta-D-mannuronate) O-acetylase; Belongs to the membrane-bound acyltransferase family.
 
    0.566
AKJ01278.1
Ferric siderophore transport system, periplasmic binding protein TonB.
  
     0.548
AKJ00366.1
Hypothetical protein.
 
     0.533
AKJ04256.1
Hypothetical protein.
  
     0.517
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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