Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI98386.1Putative lyase. (136 aa)    
Predicted Functional Partners:
AKJ01390.1
Hypothetical protein.
 
  
 0.767
AKI98387.1
Beta-hexosaminidase.
       0.523
AKJ01498.1
Glycine-rich cell wall structural protein.
  
    0.523
AKJ00349.1
Hypothetical protein.
  
     0.485
AKJ07994.1
Trehalose synthase.
  
     0.469
AKJ06239.1
Trehalose synthase.
  
     0.466
AKJ04468.1
Transcriptional regulator, LuxR family.
   
    0.465
AKJ01018.1
Peptidase, M19 family.
  
     0.464
AKJ06093.1
Carbon starvation protein A.
   
    0.460
AKJ00837.1
Peptidase, M19 family.
  
     0.454
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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