STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98387.1Beta-hexosaminidase. (368 aa)    
Predicted Functional Partners:
AKJ06287.1
Putative phosphotransferase.
 
  
 0.918
AKJ00831.1
Chitinase.
   
 
 0.906
AKI99712.1
Chitinase.
   
 
  0.902
AKJ03600.1
Endo-1,4-beta-xylanase A precursor.
     
  0.900
AKJ04562.1
Hypothetical protein.
 
  
 0.682
AKJ07666.1
Beta-hexosaminidase.
  
  
 
0.642
AKJ00615.1
Beta-hexosaminidase.
  
  
 
0.636
AKI98388.1
Putative lipoprotein.
       0.601
AKJ01566.1
Beta-lactamase class C and other penicillin binding protein.
  
 0.543
AKI98386.1
Putative lyase.
       0.523
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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