Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI98409.1Membrane protein. (1195 aa)    
Predicted Functional Partners:
AKI98410.1
ABC transporter ATP-binding protein.
 
 
 0.968
AKI99971.1
ABC transporter ATP-binding protein.
 
 
 0.866
AKJ02489.1
ABC transporter ATP-binding protein.
 
 
 0.866
AKI98412.1
ABC-type multidrug transport system, ATPase component.
  
 
 0.708
AKI98413.1
Transcriptional regulator, GntR family.
  
  
 0.564
AKI98411.1
Hypothetical protein.
       0.511
AKJ02206.1
Hypothetical protein.
  
     0.474
AKJ00469.1
Hypothetical protein.
  
     0.448
AKJ04743.1
Hypothetical protein.
 
    0.441
AKJ08360.1
Hypothetical protein.
  
     0.431
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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