Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98409.1 | AKI98410.1 | AA314_00036 | AA314_00037 | Membrane protein. | ABC transporter ATP-binding protein. | 0.970 |
AKI98409.1 | AKI98411.1 | AA314_00036 | AA314_00038 | Membrane protein. | Hypothetical protein. | 0.511 |
AKI98409.1 | AKI98412.1 | AA314_00036 | AA314_00039 | Membrane protein. | ABC-type multidrug transport system, ATPase component. | 0.732 |
AKI98409.1 | AKI98413.1 | AA314_00036 | AA314_00040 | Membrane protein. | Transcriptional regulator, GntR family. | 0.561 |
AKI98409.1 | AKI99887.1 | AA314_00036 | AA314_01514 | Membrane protein. | ABC transporter, ATP-binding protein. | 0.474 |
AKI98409.1 | AKI99971.1 | AA314_00036 | AA314_01598 | Membrane protein. | ABC transporter ATP-binding protein. | 0.876 |
AKI98409.1 | AKJ00316.1 | AA314_00036 | AA314_01942 | Membrane protein. | Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.474 |
AKI98409.1 | AKJ01078.1 | AA314_00036 | AA314_02704 | Membrane protein. | ABC transporter, ATPase subunit. | 0.474 |
AKI98409.1 | AKJ01445.1 | AA314_00036 | AA314_03071 | Membrane protein. | ABC transporter, ATP-binding protein. | 0.474 |
AKI98409.1 | AKJ02489.1 | AA314_00036 | AA314_04115 | Membrane protein. | ABC transporter ATP-binding protein. | 0.876 |
AKI98410.1 | AKI98409.1 | AA314_00037 | AA314_00036 | ABC transporter ATP-binding protein. | Membrane protein. | 0.970 |
AKI98410.1 | AKI98411.1 | AA314_00037 | AA314_00038 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.511 |
AKI98410.1 | AKI98412.1 | AA314_00037 | AA314_00039 | ABC transporter ATP-binding protein. | ABC-type multidrug transport system, ATPase component. | 0.575 |
AKI98410.1 | AKI98413.1 | AA314_00037 | AA314_00040 | ABC transporter ATP-binding protein. | Transcriptional regulator, GntR family. | 0.631 |
AKI98411.1 | AKI98409.1 | AA314_00038 | AA314_00036 | Hypothetical protein. | Membrane protein. | 0.511 |
AKI98411.1 | AKI98410.1 | AA314_00038 | AA314_00037 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.511 |
AKI98411.1 | AKI98412.1 | AA314_00038 | AA314_00039 | Hypothetical protein. | ABC-type multidrug transport system, ATPase component. | 0.773 |
AKI98411.1 | AKI98413.1 | AA314_00038 | AA314_00040 | Hypothetical protein. | Transcriptional regulator, GntR family. | 0.773 |
AKI98412.1 | AKI98409.1 | AA314_00039 | AA314_00036 | ABC-type multidrug transport system, ATPase component. | Membrane protein. | 0.732 |
AKI98412.1 | AKI98410.1 | AA314_00039 | AA314_00037 | ABC-type multidrug transport system, ATPase component. | ABC transporter ATP-binding protein. | 0.575 |
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