STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98409.1Membrane protein. (1195 aa)    
Predicted Functional Partners:
AKI98410.1
ABC transporter ATP-binding protein.
 
 
 0.970
AKI99971.1
ABC transporter ATP-binding protein.
 
 
 0.876
AKJ02489.1
ABC transporter ATP-binding protein.
 
 
 0.876
AKI98412.1
ABC-type multidrug transport system, ATPase component.
  
 
 0.732
AKI98413.1
Transcriptional regulator, GntR family.
  
  
 0.561
AKI98411.1
Hypothetical protein.
       0.511
AKI99887.1
ABC transporter, ATP-binding protein.
  
 
 0.474
AKJ00316.1
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.
  
 
 0.474
AKJ01078.1
ABC transporter, ATPase subunit.
  
 
 0.474
AKJ01445.1
ABC transporter, ATP-binding protein.
  
 
 0.474
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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