STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98418.1Hypothetical protein. (158 aa)    
Predicted Functional Partners:
AKI98840.1
Hypothetical protein.
 
    0.787
AKI99826.1
Hypothetical protein.
 
    0.787
AKJ01560.1
Hypothetical protein.
 
    0.787
AKJ06816.1
Secreted protein Hcp.
 
   
 0.743
AKJ00072.1
Hypothetical protein.
 
     0.737
AKJ06469.1
Hypothetical protein.
 
   
 0.731
AKJ06468.1
Hypothetical protein.
 
   
 0.706
AKJ06809.1
Hypothetical protein.
 
     0.705
AKJ06810.1
Putative transmembrane protein.
 
     0.695
AKJ06813.1
Hypothetical protein.
 
   
 0.693
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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