Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI98422.1Putative metal-dependent membrane protease. (245 aa)    
Predicted Functional Partners:
AKI98423.1
Transcriptional regulator, MarR family.
 
     0.566
AKJ00586.1
AknN.
  
  
 0.552
AKJ05787.1
Hypothetical protein.
  
  
 0.552
AKJ05881.1
Hypothetical protein.
  
  
 0.552
AKJ02369.1
Membrane protein.
  
    0.503
AKJ03500.1
Hypothetical protein.
  
    0.503
AKI98888.1
Nitroreductase family protein.
  
  
 0.491
AKJ04966.1
Lanthionine biosynthesis protein LanB.
  
  
 0.491
AKI99886.1
Hypothetical protein.
   
  
 0.468
AKJ01935.1
ABC transporter, permease protein.
   
  
 0.468
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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