STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98423.1Transcriptional regulator, MarR family. (160 aa)    
Predicted Functional Partners:
AKI98422.1
Putative metal-dependent membrane protease.
 
     0.571
AKI99908.1
L-proline glycine betaine binding ABC transporter protein ProX.
  
  
 0.564
AKI98424.1
Hypothetical protein.
       0.523
AKJ03336.1
Alginate lyase precursor.
  
     0.455
AKJ06477.1
Hypothetical protein.
  
     0.453
AKJ02513.1
Hypothetical protein.
 
     0.437
AKJ02873.1
Putative secreted protein.
  
     0.416
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.