STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98426.1Glycoside hydrolase, family 16 precursor. (656 aa)    
Predicted Functional Partners:
AKJ02103.1
Endo-1,4-beta-xylanase A precursor.
  
     0.775
AKJ01658.1
Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.732
AKJ01851.1
Beta-glucosidase.
 
  
 0.651
AKI99023.1
Endoglucanase E precursor.
  
     0.553
AKJ01357.1
Hypothetical protein.
  
     0.533
AKJ05389.1
Chitinase.
 
   
 0.528
AKI99191.1
Putative secreted glycosyl hydrolase; Belongs to the peptidase S1B family.
  
     0.507
AKJ07793.1
Periplasmic alpha-amylase.
  
   
 0.490
AKJ01850.1
Beta-glucosidase.
 
  
 0.477
AKI98427.1
Serine/threonine protein kinase.
       0.465
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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