STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98442.1Transcriptional regulator, AraC family protein. (331 aa)    
Predicted Functional Partners:
AKJ05362.1
Transcriptional regulator, AraC family.
  
     0.632
AKJ05015.1
Transcriptional regulator, AraC family.
  
     0.628
AKJ00607.1
Transcriptional regulator, AraC family.
  
     0.612
AKI99312.1
Transcriptional regulator, AraC family.
  
     0.567
AKI98443.1
Fmn oxidoreductase protein.
       0.564
AKI98441.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.546
AKJ06521.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.506
AKJ02366.1
Transcriptional regulator.
 
 
 0.463
AKJ02927.1
Transcriptional regulator, TetR family.
  
     0.462
AKJ06334.1
Transcriptional regulator, AraC family.
  
     0.437
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.