STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98443.1Fmn oxidoreductase protein. (362 aa)    
Predicted Functional Partners:
AKJ03008.1
Zinc-containing alcohol dehydrogenase.
  
 0.614
AKJ06942.1
Electron transfer flavoprotein, beta subunit.
  
 
 0.582
AKI98442.1
Transcriptional regulator, AraC family protein.
       0.564
AKI98441.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.478
AKJ06941.1
Electron transfer flavoprotein, alpha subunit.
   
 
 0.464
AKJ05517.1
CarD-like transcriptional regulator.
   
    0.461
AKJ06400.1
Transcriptional regulator, CarD family.
   
    0.461
AKJ03631.1
Trehalose synthase.
 
      0.459
AKJ03436.1
SSU ribosomal protein S1p.
   
    0.438
AKJ03867.1
SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
    0.438
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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