STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98444.1Hypothetical protein. (408 aa)    
Predicted Functional Partners:
AKI98668.1
Hypothetical protein.
  
 
   0.783
AKJ03190.1
DNA gyrase subunit A.
  
     0.773
AKI98532.1
Putative carbohydrate-binding protein.
  
     0.768
AKJ06169.1
Hypothetical protein.
  
 
   0.765
AKJ07985.1
Glutamate synthase [NADPH] large chain.
  
     0.764
AKJ02201.1
Hypothetical protein.
  
     0.758
AKJ07333.1
Trypsin domain protein; Belongs to the peptidase S1B family.
 
     0.751
AKJ03495.1
Rhs family protein.
 
     0.728
AKJ07688.1
Hypothetical protein.
  
     0.727
AKJ07549.1
Hypothetical protein.
  
     0.722
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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