STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98448.1Hypothetical protein. (613 aa)    
Predicted Functional Partners:
AKJ04450.1
Hypothetical protein.
  
     0.775
AKI98920.1
Hypothetical protein.
  
     0.774
AKJ00175.1
Hypothetical protein.
  
     0.774
AKJ06182.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
     0.774
AKI99889.1
Hypothetical protein.
  
     0.771
AKJ00230.1
Putative lipoprotein.
  
     0.763
AKJ01823.1
Hypothetical protein.
  
     0.763
AKJ03368.1
Glycine amidinotransferase.
  
     0.758
AKJ01795.1
Putative fibrocystin L.
  
     0.755
AKJ02499.1
Vibriolysin, extracellular zinc protease.
  
     0.755
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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