Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKI98466.1Hypothetical protein; Belongs to the UPF0337 (CsbD) family. (60 aa)    
Predicted Functional Partners:
AKJ01498.1
Glycine-rich cell wall structural protein.
  
    0.719
AKJ01499.1
Hypothetical protein.
  
    0.719
AKJ03488.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.604
AKI99757.1
Pyridoxamine 5'-phosphate oxidase.
  
    0.593
AKI99990.1
Organic hydroperoxide resistance protein.
  
  
 0.579
AKJ07183.1
Organic hydroperoxide resistance protein.
  
  
 0.579
AKJ02718.1
Teichoic acid export ATP-binding protein TagH.
  
    0.576
AKJ04038.1
Pyridoxamine 5'-phosphate oxidase.
   
  
 0.564
AKJ02717.1
O-antigen export system permease protein RfbD.
  
    0.551
AKJ01570.1
Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export.
   
    0.541
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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