Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI98468.1Nitrogenase. (515 aa)    
Predicted Functional Partners:
AKJ04142.1
Response regulator of zinc sigma-54-dependent two-component system.
  
  
 
0.912
AKJ00529.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.775
AKJ02951.1
PAS/PAC domain protein.
   
 
 0.694
AKJ08495.1
Response regulator of zinc sigma-54-dependent two-component system.
  
 
   0.597
AKI98469.1
Hypothetical protein.
       0.572
AKJ00270.1
Hypothetical protein.
   
 
 0.546
AKJ03672.1
Sensory box histidine kinase/response regulator.
   
 
 0.537
AKJ05918.1
Sensory box histidine kinase/response regulator.
   
 
 0.537
AKJ06984.1
Sensory box histidine kinase/response regulator.
   
 
 0.537
AKJ07959.1
Sensor histidine kinase.
   
 
 0.537
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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