STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98468.1Nitrogenase. (515 aa)    
Predicted Functional Partners:
AKJ04142.1
Response regulator of zinc sigma-54-dependent two-component system.
  
  
 
0.912
AKJ00529.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.774
AKJ08495.1
Response regulator of zinc sigma-54-dependent two-component system.
  
 
   0.601
AKI98469.1
Hypothetical protein.
       0.572
AKI99496.1
PAS/PAC domain protein.
   
 
 0.465
AKJ02951.1
PAS/PAC domain protein.
   
 
 0.453
AKI99786.1
Chemotaxis protein methyltransferase CheR.
   
 
 0.414
AKJ03303.1
Sensory box histidine kinase/response regulator.
 
 
 
 0.409
AKJ00270.1
Hypothetical protein.
   
 
 0.405
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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