STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98492.1Two-component sensor PilS. (567 aa)    
Predicted Functional Partners:
AKJ05090.1
Response regulator.
  
   0.808
AKJ06433.1
DNA-binding response regulator.
  
   0.805
AKJ02691.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
   0.802
AKJ08451.1
DNA-binding response regulator KdpE.
  
   0.791
AKJ08133.1
Putative two-component system response regulator.
 
 
   0.782
AKJ00404.1
DNA-binding response regulator, AraC family.
 
 
   0.774
AKI99816.1
Two-component response regulator.
 
 
   0.771
AKJ02542.1
Chemotaxis regulator.
 
 
   0.769
AKJ08317.1
Response regulator.
  
   0.765
AKI99288.1
Two-component response regulator.
 
 
   0.762
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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