STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98503.1Hypothetical protein. (336 aa)    
Predicted Functional Partners:
AKI98502.1
High-affnity carbon uptake protein Hat/HatR.
   
 0.840
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
  
 0.763
AKJ07375.1
Chaperone protein DnaK.
  
 0.637
AKJ07976.1
Hypothetical protein.
    
 0.617
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.536
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.536
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.536
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
   
 0.535
AKI98504.1
Trichohyalin.
       0.531
AKJ07821.1
Hypothetical protein.
    
 0.515
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.