Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKI98522.1Response regulator. (122 aa)    
Predicted Functional Partners:
AKI98523.1
Circadian clock protein KaiC.
       0.774
AKJ02542.1
Chemotaxis regulator.
  
   0.765
AKJ02455.1
Response regulator.
  
   0.762
AKJ05977.1
Phosphate regulon transcriptional regulatory protein PhoB.
  
    0.758
AKJ06898.1
Sensor histidine kinase.
  
    0.755
AKJ02562.1
Chemotaxis regulator.
  
   0.723
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.723
AKJ00645.1
Chemotaxis regulator.
  
 
 0.722
AKJ06292.1
Phosphate regulon transcriptional regulatory protein PhoB.
  
   0.717
AKJ07267.1
Diguanylate cyclase/phosphodiesterase.
  
 
   0.711
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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