STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98532.1Putative carbohydrate-binding protein. (548 aa)    
Predicted Functional Partners:
AKJ00175.1
Hypothetical protein.
  
     0.772
AKI98444.1
Hypothetical protein.
  
     0.768
AKJ04450.1
Hypothetical protein.
  
     0.764
AKJ00230.1
Putative lipoprotein.
  
     0.763
AKJ01823.1
Hypothetical protein.
  
    0.750
AKJ02499.1
Vibriolysin, extracellular zinc protease.
  
     0.750
AKI98448.1
Hypothetical protein.
  
     0.747
AKI98920.1
Hypothetical protein.
  
     0.734
AKJ03145.1
Cellulose-binding domain protein.
  
     0.718
AKI98668.1
Hypothetical protein.
  
    0.699
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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