STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98536.1Primosomal protein N. (322 aa)    
Predicted Functional Partners:
AKI98537.1
Primosomal protein N.
 
    
0.848
AKJ06346.1
Putative virion core protein.
  
     0.760
AKJ06566.1
MJ0042 family finger-like domain protein.
  
     0.719
AKJ01970.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.592
AKI99978.1
Trans-aconitate 2-methyltransferase.
  
     0.561
AKJ03449.1
Aha1 domain protein.
  
     0.503
AKJ01511.1
Endonuclease/exonuclease/phosphatase family.
  
     0.473
AKJ04020.1
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
    0.459
AKI99960.1
Putative fatty acid desaturase.
  
     0.431
AKJ00173.1
Putative membrane protein.
  
     0.417
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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