STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98542.1Lactoylglutathione lyase. (116 aa)    
Predicted Functional Partners:
AKI99070.1
Hydrolase, alpha/beta fold family.
 
 
    0.667
AKI98543.1
Sensory box histidine kinase.
  
    0.547
AKJ02486.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
    0.468
AKJ03799.1
Transcriptional regulator, HxlR family.
 
    0.465
AKJ04468.1
Transcriptional regulator, LuxR family.
   
    0.446
AKJ06041.1
Gfa-like protein.
 
    0.442
AKJ06232.1
Permease of the drug/metabolite transporter.
  
     0.441
AKJ07910.1
Hypothetical protein.
  
     0.441
AKJ06093.1
Carbon starvation protein A.
   
    0.424
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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