Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI98571.1Chemotaxis protein methyltransferase CheR. (955 aa)    
Predicted Functional Partners:
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.881
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.867
AKJ05090.1
Response regulator.
 
   0.805
AKJ02816.1
Sensor histidine kinase/response rgulator.
 
 
 0.798
AKJ08451.1
DNA-binding response regulator KdpE.
 
   0.782
AKJ06433.1
DNA-binding response regulator.
 
   0.779
AKJ02691.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
   0.772
AKJ02562.1
Chemotaxis regulator.
 
   0.770
AKI99816.1
Two-component response regulator.
 
 
   0.767
AKJ06279.1
Putative two-component system response regulator.
 
   0.764
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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