STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98572.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
AKI98573.1
Hypothetical protein.
       0.718
AKJ02194.1
Hypothetical protein.
  
     0.636
AKI99203.1
Putative asmA protein precursor.
  
     0.552
AKJ06884.1
TPR domain protein.
  
     0.551
AKI98574.1
Hypothetical protein.
       0.541
AKJ00217.1
Hypothetical protein.
  
     0.475
AKI98571.1
Chemotaxis protein methyltransferase CheR.
       0.467
AKJ00485.1
Hypothetical protein.
  
     0.467
AKI98965.1
Tryptophan synthase alpha chain.
  
     0.463
AKI99038.1
Fatty acid desaturase family protein.
  
     0.456
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.