STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98578.1Hypothetical protein. (455 aa)    
Predicted Functional Partners:
AKI98576.1
Eukaryotic DNA ligase III like protein.
 
     0.760
AKI98579.1
Hypothetical protein.
       0.746
AKI98497.1
Hypothetical protein.
 
     0.694
AKI99032.1
ABC transport protein, ATP-binding subunit.
 
     0.633
AKJ03683.1
Hypothetical protein.
 
     0.601
AKI98577.1
Hypothetical protein.
       0.577
AKI98573.1
Hypothetical protein.
 
     0.563
AKJ07337.1
Hypothetical protein.
  
     0.533
AKI99139.1
Hypothetical protein.
  
     0.527
AKJ03629.1
Hypothetical protein.
  
     0.509
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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