STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98583.1Acyltransferase family protein. (145 aa)    
Predicted Functional Partners:
AKI98584.1
Alpha/beta hydrolase fold protein.
  
   0.783
AKI98585.1
Proline dehydrogenase.
       0.718
AKJ00154.1
Hypothetical protein.
  
     0.607
AKJ01505.1
Hypothetical protein.
 
     0.560
AKJ06280.1
Signal recognition particle receptor protein FtsY.
 
    0.527
AKJ07515.1
Microbial collagenase, secreted.
  
     0.510
AKJ07788.1
Membrane-anchored protein.
  
     0.502
AKJ03653.1
HAD superfamily.
  
     0.496
AKJ07908.1
Putative integral membrane protein.
  
     0.494
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.490
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.