STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98585.1Proline dehydrogenase. (311 aa)    
Predicted Functional Partners:
AKJ06901.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
 0.978
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.928
AKJ03771.1
Ornithine cyclodeaminase.
  
 
 0.920
AKJ04069.1
WD-repeat protein.
     
  0.900
AKJ04291.1
Carbapenem antibiotics biosynthesis protein carD.
     
  0.900
AKJ04675.1
Proline iminopeptidase; Belongs to the peptidase S33 family.
     
  0.900
AKJ07430.1
Proline iminopeptidase.
     
  0.900
AKI99705.1
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.776
AKJ03773.1
Aldehyde dehydrogenase B; Belongs to the aldehyde dehydrogenase family.
 
 
 0.754
AKJ06789.1
Two-component sensor CbrA: intrcellular carbon:nitrogen balance.
  
  
 0.725
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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