STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98591.1Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family. (210 aa)    
Predicted Functional Partners:
AKJ01485.1
Alkyl hydroperoxide reductase protein C.
  
 0.825
AKI99376.1
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase.
  
 
 0.616
AKJ02600.1
Cell division protein FtsK.
  
 
 0.581
AKJ01050.1
Peptide methionine sulfoxide reductase MsrA.
   
 0.577
msrA
Peptide methionine sulfoxide reductase MsrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.577
msrA-2
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.577
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.561
AKJ03018.1
Cytochrome c heme lyase subunit CcmF.
  
  
 0.560
AKJ03021.1
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE.
  
  
 0.556
AKI98593.1
Glutathione reductase; Maintains high levels of reduced glutathione.
  
 0.546
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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