Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
AKI98602.1DNA gyrase subunit A. (1244 aa)    
Predicted Functional Partners:
AKI99006.1
TPR repeat protein.
  
 
  0.772
AKJ06284.1
TPR repeat protein.
  
 
  0.760
AKI99916.1
NAD-dependent protein deacetylase.
   
  0.756
cobB
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
  0.756
AKJ06055.1
NAD-dependent protein deacetylase.
   
  0.756
AKJ08361.1
Hypothetical protein.
   
  0.756
AKJ08378.1
NAD-dependent protein deacetylase.
   
  0.756
AKJ08383.1
NAD-dependent protein deacetylase.
   
  0.756
AKJ01185.1
DNA recombination protein RmuC.
 
 
  0.707
AKJ01749.1
TPR repeat protein.
 
     0.676
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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