Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKI98654.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
AKJ04621.1
Monooxygenase, flavin-binding family.
  
   
 0.704
AKI98858.1
TesB-like acyl-CoA thioesterase 1.
  
     0.664
AKI99610.1
Cyclohexanone monooxygenase.
  
   
 0.625
AKJ04461.1
Hypothetical protein.
  
     0.600
AKJ04959.1
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.589
AKI98655.1
Sterol desaturase family protein, putative.
       0.564
AKJ04210.1
Isovaleryl-CoA dehydrogenase.
  
     0.524
AKJ01646.1
Acyl dehydratase.
  
  
 0.512
AKJ04212.1
Putative acyl-coa dehydrogenase fade36.
  
     0.480
AKI98653.1
Hypothetical protein.
       0.469
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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