STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98663.1Threonine dehydrogenase. (380 aa)    
Predicted Functional Partners:
AKI98662.1
Hypothetical protein.
 
     0.899
AKJ02274.1
Alcohol dehydrogenase GroES domain protein.
 
     0.684
AKJ07428.1
Hypothetical protein.
 
    0.600
AKI98664.1
Hypothetical protein.
       0.588
AKJ00534.1
Oxidoreductase.
 
    0.582
AKJ00278.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.563
AKJ01451.1
FAD dependent oxidoreductase.
 
  
 0.461
AKI98665.1
Hypothetical protein.
       0.445
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
  
 0.445
AKJ01608.1
8-amino-7-oxononanoate synthase.
  
  
 0.445
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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