Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI98682.1Hypothetical protein. (290 aa)    
Predicted Functional Partners:
AKJ07829.1
Hypothetical protein.
  
     0.774
AKJ01823.1
Hypothetical protein.
  
     0.770
AKJ02499.1
Vibriolysin, extracellular zinc protease.
  
     0.770
AKJ00415.1
Hypothetical protein.
  
     0.765
AKJ02360.1
Hypothetical protein.
  
     0.761
AKJ08261.1
BNR repeat domain protein.
  
     0.748
AKI98792.1
Heat shock protein DnaJ domain protein.
  
     0.746
AKJ00230.1
Putative lipoprotein.
  
     0.745
AKI98920.1
Hypothetical protein.
  
     0.732
AKJ04505.1
Hypothetical protein.
  
     0.729
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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