Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI98683.1Transglutaminase-like enzymes, putative cysteine protease. (651 aa)    
Predicted Functional Partners:
AKI98684.1
Hypothetical protein.
 
  
 0.936
AKJ04314.1
MoxR-like ATPase.
 
   
 0.759
AKI98686.1
MoxR-like ATPase.
 
   
 0.758
AKJ04315.1
Hypothetical protein.
 
  
 0.732
AKJ02653.1
MoxR-like ATPase.
 
   
 0.685
AKJ07501.1
MoxR-like ATPase.
 
   
 0.658
AKJ05767.1
MoxR-like ATPase.
 
   
 0.640
AKI98685.1
Hypothetical protein.
       0.567
AKI98682.1
Hypothetical protein.
       0.482
AKJ07660.1
MoxR protein.
 
   
 0.444
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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