STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98684.1Hypothetical protein. (403 aa)    
Predicted Functional Partners:
AKI98683.1
Transglutaminase-like enzymes, putative cysteine protease.
 
    0.939
AKJ05783.1
RDD domain protein.
 
    0.710
AKJ04886.1
RDD family protein.
 
    0.707
AKJ05774.1
Hypothetical protein.
 
  
 0.650
AKJ04887.1
Hypothetical protein.
 
  
 0.646
AKJ04316.1
Hypothetical protein.
 
    0.637
AKJ05768.1
Hypothetical protein.
  
     0.600
AKI98686.1
MoxR-like ATPase.
 
  
 0.585
AKI98685.1
Hypothetical protein.
       0.567
AKJ05767.1
MoxR-like ATPase.
 
  
 0.512
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.