STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98693.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
AKJ02898.1
Hypothetical protein.
   
  
 0.759
AKJ05041.1
Hypothetical protein.
   
  
 0.759
AKJ07347.1
Hypothetical protein.
   
  
 0.759
AKI98692.1
Hypothetical protein.
       0.682
AKI98695.1
Hypothetical protein.
       0.645
AKJ02979.1
Tryptophan synthase alpha chain.
   
  
 0.503
AKI98694.1
Hypothetical protein.
       0.484
AKJ06132.1
Hypothetical protein.
  
     0.437
AKI98696.1
Hypothetical protein.
       0.411
AKI98697.1
Hypothetical protein.
       0.411
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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