STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98698.1Hypothetical protein. (1021 aa)    
Predicted Functional Partners:
AKJ00072.1
Hypothetical protein.
 
  
 0.929
AKJ02240.1
Hypothetical protein.
 
  
 0.890
AKJ02236.1
Putative cytoplasmic protein USSDB7A.
 
  
 0.889
AKJ06814.1
Hypothetical protein.
 
  
 0.887
AKJ02238.1
Hypothetical protein.
 
  
 0.884
AKJ04098.1
Hypothetical protein.
 
  
 0.884
AKJ02233.1
Hypothetical protein.
 
  
 0.883
AKJ06819.1
Hypothetical protein.
 
  
 0.883
AKJ06810.1
Putative transmembrane protein.
 
  
 0.838
AKI98696.1
Hypothetical protein.
 
   
 0.837
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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