Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98708.1 | AKI98709.1 | AA314_00335 | AA314_00336 | Putative inner membrane protein. | Hypothetical protein. | 0.422 |
AKI98708.1 | AKJ02302.1 | AA314_00335 | AA314_03928 | Putative inner membrane protein. | L,D-transpeptidase. | 0.697 |
AKI98708.1 | AKJ02385.1 | AA314_00335 | AA314_04011 | Putative inner membrane protein. | Ribonuclease I precursor; Belongs to the RNase T2 family. | 0.543 |
AKI98708.1 | AKJ02936.1 | AA314_00335 | AA314_04562 | Putative inner membrane protein. | Putative periplasmic protein. | 0.425 |
AKI98708.1 | AKJ07482.1 | AA314_00335 | AA314_09108 | Putative inner membrane protein. | TPR domain protein. | 0.423 |
AKI98708.1 | AKJ07579.1 | AA314_00335 | AA314_09205 | Putative inner membrane protein. | Beta-lactamase. | 0.455 |
AKI98708.1 | AKJ07944.1 | AA314_00335 | AA314_09570 | Putative inner membrane protein. | Hypothetical protein. | 0.531 |
AKI98708.1 | ybeY | AA314_00335 | AA314_04198 | Putative inner membrane protein. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.465 |
AKI98709.1 | AKI98708.1 | AA314_00336 | AA314_00335 | Hypothetical protein. | Putative inner membrane protein. | 0.422 |
AKJ02302.1 | AKI98708.1 | AA314_03928 | AA314_00335 | L,D-transpeptidase. | Putative inner membrane protein. | 0.697 |
AKJ02302.1 | AKJ02385.1 | AA314_03928 | AA314_04011 | L,D-transpeptidase. | Ribonuclease I precursor; Belongs to the RNase T2 family. | 0.405 |
AKJ02385.1 | AKI98708.1 | AA314_04011 | AA314_00335 | Ribonuclease I precursor; Belongs to the RNase T2 family. | Putative inner membrane protein. | 0.543 |
AKJ02385.1 | AKJ02302.1 | AA314_04011 | AA314_03928 | Ribonuclease I precursor; Belongs to the RNase T2 family. | L,D-transpeptidase. | 0.405 |
AKJ02936.1 | AKI98708.1 | AA314_04562 | AA314_00335 | Putative periplasmic protein. | Putative inner membrane protein. | 0.425 |
AKJ07482.1 | AKI98708.1 | AA314_09108 | AA314_00335 | TPR domain protein. | Putative inner membrane protein. | 0.423 |
AKJ07579.1 | AKI98708.1 | AA314_09205 | AA314_00335 | Beta-lactamase. | Putative inner membrane protein. | 0.455 |
AKJ07944.1 | AKI98708.1 | AA314_09570 | AA314_00335 | Hypothetical protein. | Putative inner membrane protein. | 0.531 |
ybeY | AKI98708.1 | AA314_04198 | AA314_00335 | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Putative inner membrane protein. | 0.465 |