STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98711.1Spore photoproduct lyase. (369 aa)    
Predicted Functional Partners:
AKJ07835.1
Hypothetical protein.
 
     0.737
AKJ06122.1
Hypothetical protein.
  
     0.734
AKJ03341.1
Hypothetical protein.
  
     0.726
AKI98662.1
Hypothetical protein.
  
     0.713
AKJ05007.1
Hypothetical protein.
 
     0.640
AKJ00396.1
Hypothetical protein.
  
     0.555
AKI98710.1
Hypothetical protein.
       0.523
AKJ03229.1
Transcriptional regulator, TetR family.
  
     0.510
AKI99773.1
Hypothetical protein.
  
     0.508
AKJ05852.1
Hypothetical protein.
  
     0.506
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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