Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI98743.1Hypothetical protein. (331 aa)    
Predicted Functional Partners:
AKI99912.1
Myosin heavy chain.
  
     0.657
AKJ01715.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.623
AKI99982.1
Internalin, putative.
  
     0.598
AKJ06371.1
Hypothetical protein.
  
     0.580
AKJ06593.1
DNA gyrase subunit A.
  
     0.580
AKJ07698.1
Hypothetical protein.
  
     0.570
AKJ07847.1
Hypothetical protein.
  
     0.569
AKJ07823.1
Cna B domain protein.
  
     0.566
AKJ01534.1
O-methyltransferase, family 2.
  
     0.556
AKI99960.1
Putative fatty acid desaturase.
  
     0.546
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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