STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98759.1Cytochrome c oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (540 aa)    
Predicted Functional Partners:
AKI98758.1
Cytochrome c oxidase polypeptide III.
 
 0.997
AKI98760.1
Cytochrome c oxidase polypeptide II.
 
 0.997
AKJ07157.1
Cytochrome c oxidase polypeptide III.
 0.989
AKJ07155.1
Cytochrome c oxidase polypeptide II.
 
 0.987
ctaB
Heme O synthase, protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.960
AKI98767.1
Molybdopterin oxidoreductase.
 
 0.934
AKI98763.1
ABC-type Fe3+ transport system protein.
 
 
 0.914
AKI98764.1
ABC-type Fe3+ transport system protein.
 
 
 0.910
nuoH
NADH-ubiquinone oxidoreductase chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
 0.908
AKJ07156.1
Cytochrome c oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
  
 
0.901
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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