Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKI98771.1Prenyltransferase. (299 aa)    
Predicted Functional Partners:
AKJ00561.1
Endoglucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
   
 0.760
AKJ08214.1
Pentalenene synthase.
  
   
 0.742
AKJ08069.1
Pentalenene synthase.
  
     0.704
AKJ00206.1
Endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.625
AKJ07251.1
Glutathione S-transferase; Belongs to the GST superfamily.
  
     0.613
AKJ04752.1
Extracellular protease precursor.
  
     0.584
AKJ03535.1
Extracellular protease precursor.
  
     0.575
AKJ00272.1
Hypothetical protein.
  
  
 0.542
AKJ03930.1
Hypothetical protein.
  
  
 0.542
AKJ07946.1
Hypothetical protein.
  
  
 0.542
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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