STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98771.1Prenyltransferase. (299 aa)    
Predicted Functional Partners:
AKJ00561.1
Endoglucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.756
AKJ08214.1
Pentalenene synthase.
  
     0.719
AKJ08069.1
Pentalenene synthase.
  
     0.704
AKJ00206.1
Endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.625
AKJ07251.1
Glutathione S-transferase; Belongs to the GST superfamily.
  
     0.613
atpD
ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.591
AKJ04752.1
Extracellular protease precursor.
  
     0.584
AKJ03535.1
Extracellular protease precursor.
  
     0.575
AKJ00272.1
Hypothetical protein.
  
  
 0.512
AKJ03930.1
Hypothetical protein.
  
  
 0.512
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.