STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKI98797.1Periplasmic sugar-binding domain protein. (397 aa)    
Predicted Functional Partners:
AKJ05412.1
ATP binding protein.
 
 
 0.957
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
   
 
 0.899
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
   
 
 0.896
AKI99496.1
PAS/PAC domain protein.
   
 
 0.890
AKJ00035.1
Hypothetical protein.
  
 
 0.866
AKJ02082.1
Chemotaxis protein methyltransferase CheR.
   
 
 0.862
AKI98556.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.859
AKI99665.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.859
AKJ03002.1
Circadian input kinase A.
  
 
 0.859
AKJ04058.1
Two-component sensor histidine kinase.
  
 
 0.859
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.