Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKI98803.1Hypothetical protein. (207 aa)    
Predicted Functional Partners:
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.776
AKI98804.1
Hypothetical protein.
       0.773
AKI99626.1
Ankyrin repeat protein.
  
     0.765
AKJ00362.1
Ankyrin repeat protein.
  
     0.764
AKI99995.1
Hypothetical protein.
  
     0.722
AKI98812.1
Hypothetical protein.
  
 
  0.676
AKJ07375.1
Chaperone protein DnaK.
  
 0.604
AKJ00725.1
Kinesin light chain-like protein.
  
 
  0.591
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
  
 0.590
AKJ01255.1
TolA protein.
  
 0.577
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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